Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-f crispr-associated protein csy1 | VEIS_RS07095 | Q02ML9 | Negative | 1630077 - 1631429 | 50916.0 |
| type i-f crispr-associated helicase cas3f | VEIS_RS07100 | Q02ML8 | Negative | 1631532 - 1635035 | 131249.0 |
| type i-f crispr-associated endonuclease cas1f | VEIS_RS07105 | Q02ML7 | Negative | 1635032 - 1636021 | 36198.4 |
| histidine phosphatase family protein | VEIS_RS07110 | Q9SCS3 | Negative | 1636168 - 1636806 | 23439.7 |
| duf4136 domain-containing protein | VEIS_RS07115 | Not Available | Negative | 1636817 - 1637425 | 21908.2 |
| trna 2-thiocytidine(32) synthetase ttca | VEIS_RS07120 | A1WHW6 | Negative | 1637483 - 1638433 | 34769.1 |
| dihydroneopterin aldolase | VEIS_RS07125 | Not Available | Negative | 1638438 - 1638809 | 13660.7 |
| sdr family oxidoreductase | VEIS_RS07130 | P42556 | Negative | 1638813 - 1639631 | 28656.3 |
| class i sam-dependent methyltransferase | VEIS_RS07135 | Not Available | Positive | 1639697 - 1640815 | 40099.0 |
| duf2905 domain-containing protein | VEIS_RS07140 | Not Available | Positive | 1641054 - 1641248 | 7415.62 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
