Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-acp dehydratase fabz | VEIS_RS07055 | A1WHV3 | Positive | 1604739 - 1605194 | 16782.7 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | VEIS_RS07060 | A1WHV4 | Positive | 1605210 - 1605998 | 27632.7 |
| lipid-a-disaccharide synthase | VEIS_RS07065 | A1WHV5 | Positive | 1606020 - 1607177 | 42390.2 |
| ribonuclease hii | VEIS_RS07070 | A1WHV6 | Positive | 1607149 - 1607778 | 22342.3 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS25745 | P94538 | Positive | 1607775 - 1608536 | 26927.7 |
| is630 family transposase | VEIS_RS27605 | Not Available | Negative | 1611277 - 1611843 | 20665.8 |
| is630 transposase-related protein | VEIS_RS27610 | Not Available | Negative | 1611848 - 1612213 | 14225.2 |
| type i-f crispr-associated endoribonuclease cas6/csy4 | VEIS_RS07080 | Q6D0W5 | Negative | 1627377 - 1627949 | 21327.8 |
| type i-f crispr-associated protein csy3 | VEIS_RS07085 | Q02MM1 | Negative | 1627958 - 1629037 | 39377.6 |
| type i-f crispr-associated protein csy2 | VEIS_RS07090 | Q02MM0 | Negative | 1629034 - 1630077 | 39059.5 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
