Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor ts | VEIS_RS07005 | A1WHU3 | Positive | 1594277 - 1595203 | 32364.1 |
| ump kinase | VEIS_RS07010 | A1WHU4 | Positive | 1595285 - 1596007 | 25487.3 |
| ribosome recycling factor | VEIS_RS07015 | A1WHU5 | Positive | 1596041 - 1596601 | 20702.1 |
| polyprenyl diphosphate synthase | VEIS_RS07020 | Q82TZ9 | Positive | 1596614 - 1597345 | 26341.6 |
| phosphatidate cytidylyltransferase | VEIS_RS07025 | Q59640 | Positive | 1597355 - 1598206 | 30008.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | VEIS_RS07030 | Q8XZI5 | Positive | 1598203 - 1599387 | 42031.9 |
| rip metalloprotease rsep | VEIS_RS07035 | Q8XZI4 | Positive | 1599417 - 1600796 | 49516.8 |
| outer membrane protein assembly factor bama | VEIS_RS07040 | Q9K1H0 | Positive | 1600854 - 1603151 | 85551.1 |
| omph family outer membrane protein | VEIS_RS07045 | Not Available | Positive | 1603151 - 1603705 | 20771.6 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | VEIS_RS07050 | A1WHV2 | Positive | 1603742 - 1604722 | 33860.9 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
