Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS06960 | Not Available | Negative | 1586223 - 1587209 | 34678.1 |
| amino acid synthesis family protein | VEIS_RS06965 | Not Available | Negative | 1587289 - 1587870 | 20721.3 |
| nad(p)-dependent oxidoreductase | VEIS_RS06970 | Q9I5I6 | Negative | 1587979 - 1588872 | 31389.3 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS06975 | Q9AQI0 | Negative | 1588946 - 1589284 | 11679.0 |
| is630 transposase-related protein | VEIS_RS27595 | Not Available | Positive | 1589353 - 1589718 | 14225.2 |
| is630 family transposase | VEIS_RS27600 | Not Available | Positive | 1589723 - 1590289 | 20665.8 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS06985 | Not Available | Negative | 1590303 - 1590641 | 11895.8 |
| lysr family transcriptional regulator | VEIS_RS06990 | P0A4T4 | Negative | 1590765 - 1591706 | 34362.9 |
| amidase | VEIS_RS06995 | Q38M35 | Negative | 1591703 - 1593076 | 47874.1 |
| 30s ribosomal protein s2 | VEIS_RS07000 | A1WHU2 | Positive | 1593403 - 1594155 | 27570.4 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
