Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanine deaminase | VEIS_RS06530 | P76641 | Positive | 1481603 - 1482901 | 46964.1 |
| dctp deaminase | VEIS_RS06535 | A1TL98 | Positive | 1482976 - 1483548 | 21247.3 |
| delta(1)-pyrroline-2-carboxylate reductase family protein | VEIS_RS06540 | A9AKH1 | Negative | 1483590 - 1484534 | 31844.7 |
| dead/deah box helicase | VEIS_RS06545 | P25888 | Positive | 1484780 - 1486240 | 53046.5 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | VEIS_RS06550 | A1TLA3 | Negative | 1486274 - 1487101 | 29686.9 |
| h-ns family nucleoid-associated regulatory protein | VEIS_RS06555 | A4JS72 | Positive | 1487466 - 1487777 | 11522.8 |
| aconitate hydratase acna | VEIS_RS06560 | Q8ZP52 | Positive | 1487933 - 1490752 | 101271.0 |
| eal domain-containing protein | VEIS_RS06565 | Not Available | Positive | 1490827 - 1493406 | 93824.9 |
| bifunctional diguanylate cyclase/phosphodiesterase | VEIS_RS06570 | Q9I310 | Positive | 1493403 - 1495913 | 91133.6 |
| fad-dependent monooxygenase | VEIS_RS06575 | Q3S4B7 | Positive | 1496107 - 1497372 | 45416.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
