Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3683 domain-containing protein | VEIS_RS06395 | O29853 | Positive | 1452175 - 1456053 | 142878.0 |
| hypothetical protein | VEIS_RS25650 | Not Available | Positive | 1456189 - 1456341 | 5619.91 |
| abc transporter substrate-binding protein | VEIS_RS06400 | Not Available | Positive | 1456522 - 1457433 | 32193.2 |
| amino acid abc transporter permease/atp-binding protein | VEIS_RS06405 | Not Available | Positive | 1457461 - 1458999 | 55610.0 |
| gntr family transcriptional regulator | VEIS_RS06415 | Not Available | Negative | 1459537 - 1460220 | 25491.1 |
| duf1989 domain-containing protein | VEIS_RS06420 | Q10082 | Negative | 1460199 - 1461056 | 31840.9 |
| gamma-butyrobetaine hydroxylase-like domain-containing protein | VEIS_RS06425 | Not Available | Positive | 1461255 - 1461671 | 15002.7 |
| hypothetical protein | VEIS_RS30315 | Not Available | Positive | 1462378 - 1462635 | 9342.19 |
| hypothetical protein | VEIS_RS29625 | Not Available | Negative | 1462700 - 1462843 | 5312.5 |
| 4'-phosphopantetheinyl transferase superfamily protein | VEIS_RS06435 | Not Available | Positive | 1462825 - 1463592 | 28558.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
