Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter kup | VEIS_RS06115 | A1WHB4 | Positive | 1393665 - 1395533 | 67281.3 |
| d-alanyl-d-alanine carboxypeptidase family protein | VEIS_RS06120 | P08506 | Positive | 1395647 - 1396816 | 41928.9 |
| fcd domain-containing protein | VEIS_RS06125 | Not Available | Negative | 1396922 - 1397290 | 13516.7 |
| enoyl-coa hydratase/isomerase family protein | VEIS_RS06130 | Q9FHR8 | Positive | 1397462 - 1398223 | 27745.6 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS06135 | Not Available | Positive | 1398278 - 1399231 | 32897.9 |
| caib/baif coa-transferase family protein | VEIS_RS06140 | Not Available | Positive | 1399228 - 1400397 | 42173.8 |
| hypothetical protein | VEIS_RS28330 | Not Available | Positive | 1400460 - 1400765 | 11475.2 |
| 30s ribosomal protein s12 | VEIS_RS06145 | A1WHC0 | Positive | 1400838 - 1401215 | 13901.0 |
| 30s ribosomal protein s7 | VEIS_RS06150 | A1WHC1 | Positive | 1401373 - 1401846 | 18009.2 |
| elongation factor g | VEIS_RS06155 | A1WHC2 | Positive | 1402013 - 1404115 | 77288.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
