Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | VEIS_RS00585 | Not Available | Negative | 138382 - 139413 | 36915.1 |
| abc transporter atp-binding protein | VEIS_RS00590 | Not Available | Negative | 139410 - 140480 | 38326.9 |
| abc transporter permease | VEIS_RS00595 | Not Available | Negative | 140477 - 141334 | 29937.4 |
| abc transporter permease subunit | VEIS_RS00600 | Not Available | Negative | 141324 - 142670 | 46449.0 |
| sdr family nad(p)-dependent oxidoreductase | VEIS_RS00605 | Q9F7E0 | Negative | 142797 - 143639 | 29141.2 |
| hypothetical protein | VEIS_RS27960 | Not Available | Negative | 143822 - 144028 | 7382.2 |
| laci family dna-binding transcriptional regulator | VEIS_RS00610 | P46828 | Negative | 144204 - 145247 | 38119.2 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS00615 | Not Available | Positive | 145577 - 146662 | 37311.9 |
| amp-binding protein | VEIS_RS00620 | O06417 | Positive | 146659 - 147552 | 31542.6 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS00625 | Not Available | Positive | 147779 - 148003 | 8987.61 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
