Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit i | VEIS_RS05740 | D9IA43 | Negative | 1291810 - 1293270 | 53927.4 |
| cbb3-type cytochrome oxidase assembly protein ccos | VEIS_RS05745 | Not Available | Negative | 1293335 - 1293472 | 5169.43 |
| cation-translocating p-type atpase | VEIS_RS05750 | Q59207 | Negative | 1293493 - 1295940 | 86049.6 |
| universal stress protein | VEIS_RS05755 | Not Available | Positive | 1296053 - 1296496 | 15523.1 |
| methylation-associated defense system helix-turn-helix domain-containing protein mad1 | VEIS_RS05760 | Not Available | Positive | 1297004 - 1297201 | 7626.93 |
| dna cytosine methyltransferase | VEIS_RS05765 | P25265 | Positive | 1297268 - 1298317 | 38727.9 |
| very short patch repair endonuclease | VEIS_RS05770 | P50186 | Positive | 1298339 - 1298797 | 17435.8 |
| disarm system snf2-like helicase drmd | VEIS_RS05775 | A7FM96 | Positive | 1298817 - 1301912 | 116421.0 |
| duf2075 domain-containing protein | VEIS_RS05780 | Not Available | Positive | 1301909 - 1303930 | 74809.4 |
| eco57i restriction-modification methylase domain-containing protein | VEIS_RS05785 | Not Available | Positive | 1303927 - 1308285 | 163186.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
