Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VEIS_RS28295 | Not Available | Negative | 1206847 - 1207020 | 5984.24 |
| hypothetical protein | VEIS_RS25530 | Not Available | Negative | 1206986 - 1207138 | 5530.87 |
| adenosine deaminase | VEIS_RS05330 | Q21T97 | Negative | 1207203 - 1208255 | 38898.4 |
| l-fuconate dehydratase | VEIS_RS05335 | Q0QWS4 | Negative | 1208599 - 1209879 | 47948.0 |
| ureidoglycolate lyase | VEIS_RS05340 | A0B3M8 | Negative | 1209919 - 1210776 | 30253.5 |
| abc transporter substrate-binding protein | VEIS_RS05345 | B9JK76 | Negative | 1210820 - 1211761 | 33182.2 |
| abc transporter permease | VEIS_RS05350 | Not Available | Negative | 1211795 - 1212814 | 35580.7 |
| sugar abc transporter atp-binding protein | VEIS_RS05355 | Q399X3 | Negative | 1212832 - 1214355 | 54886.3 |
| sdr family oxidoreductase | VEIS_RS05360 | Q8P3K4 | Negative | 1214370 - 1215122 | 26242.7 |
| iclr family transcriptional regulator | VEIS_RS05365 | Not Available | Positive | 1215304 - 1216065 | 27704.6 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
