Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme biosynthesis protein hemy | VEIS_RS05100 | Not Available | Negative | 1151998 - 1153293 | 47127.7 |
| uroporphyrinogen-iii c-methyltransferase | VEIS_RS05105 | Not Available | Negative | 1153310 - 1154383 | 38337.8 |
| uroporphyrinogen-iii synthase | VEIS_RS05110 | Not Available | Negative | 1154380 - 1155228 | 29622.3 |
| hydroxymethylbilane synthase | VEIS_RS05115 | Q21XQ9 | Negative | 1155234 - 1156280 | 36761.5 |
| phosphoenolpyruvate carboxylase | VEIS_RS05120 | A1WGR0 | Positive | 1156378 - 1159170 | 102621.0 |
| tex family protein | VEIS_RS05125 | P46837 | Positive | 1159261 - 1161639 | 86245.6 |
| hdod domain-containing protein | VEIS_RS05130 | Not Available | Positive | 1161700 - 1162566 | 31092.3 |
| hypothetical protein | VEIS_RS28290 | Not Available | Positive | 1162742 - 1162924 | 6419.58 |
| 4-hydroxyproline epimerase | VEIS_RS05135 | Q9I476 | Negative | 1162936 - 1163889 | 33684.9 |
| branched-chain amino acid abc transporter substrate-binding protein | VEIS_RS05140 | Q1MDE9 | Negative | 1163911 - 1165047 | 40152.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
