Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system beta propeller repeat protein tolb | VEIS_RS04975 | Q21WN7 | Positive | 1123674 - 1125002 | 47559.1 |
| peptidoglycan-associated lipoprotein pal | VEIS_RS04980 | P0A913 | Positive | 1125048 - 1125596 | 19518.2 |
| tol-pal system protein ybgf | VEIS_RS04985 | Not Available | Positive | 1125593 - 1126390 | 29793.5 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS29575 | Q46927 | Positive | 1126390 - 1126974 | 21362.6 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30225 | Not Available | Positive | 1127161 - 1127382 | 7715.1 |
| Trna-lys | Not Available | Not Available | Positive | 1127458 - 1127533 | Not Available |
| restriction endonuclease subunit s | VEIS_RS05000 | P19705 | Negative | 1127770 - 1129497 | 63445.3 |
| class i sam-dependent dna methyltransferase | VEIS_RS05005 | Q47282 | Negative | 1129509 - 1130966 | 54765.6 |
| ecoai/ftnuii family type i restriction enzme subunit r | VEIS_RS05010 | Q07736 | Negative | 1131322 - 1133556 | 82927.5 |
| recombination-associated protein rdgc | VEIS_RS05015 | Q478Z5 | Negative | 1133757 - 1134737 | 35118.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
