Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | VEIS_RS04650 | O58969 | Positive | 1057692 - 1058960 | 45815.2 |
| carbohydrate abc transporter permease | VEIS_RS04655 | P40979 | Positive | 1058964 - 1059893 | 33878.1 |
| carbohydrate abc transporter permease | VEIS_RS04660 | P40980 | Positive | 1059895 - 1060740 | 30926.4 |
| abc transporter atp-binding protein | VEIS_RS04665 | Q01937 | Positive | 1060746 - 1061900 | 41681.6 |
| laci family dna-binding transcriptional regulator | VEIS_RS04670 | P0ACN9 | Positive | 1061897 - 1062910 | 35286.8 |
| aminoacyl-trna hydrolase | VEIS_RS04675 | A1TT75 | Negative | 1063174 - 1063782 | 22407.1 |
| 50s ribosomal protein l25/general stress protein ctc | VEIS_RS04680 | A1WGH1 | Negative | 1063890 - 1064597 | 25269.8 |
| ribose-phosphate pyrophosphokinase | VEIS_RS04685 | Q8Y2E1 | Negative | 1064697 - 1065671 | 35266.7 |
| Trna-gln | Not Available | Not Available | Positive | 1065733 - 1065809 | Not Available |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | VEIS_RS04695 | A1WGH3 | Negative | 1065840 - 1066742 | 31532.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
