Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smc-scp complex subunit scpb | VEIS_RS00440 | Q83CP9 | Negative | 103292 - 103942 | 23967.6 |
| rlua family pseudouridine synthase | VEIS_RS00445 | Q8XYX8 | Negative | 104197 - 105231 | 37307.0 |
| peptidoglycan dd-metalloendopeptidase family protein | VEIS_RS00450 | P45682 | Negative | 105237 - 106118 | 30466.6 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | VEIS_RS00455 | A2SF76 | Negative | 106129 - 106896 | 26451.6 |
| 5'/3'-nucleotidase sure | VEIS_RS00460 | A1WE26 | Negative | 106896 - 107675 | 27452.8 |
| nadph:quinone oxidoreductase family protein | VEIS_RS00465 | A7RK30 | Positive | 107807 - 108781 | 33772.0 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS00470 | P42251 | Positive | 108805 - 109320 | 18890.6 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS00475 | Not Available | Positive | 109468 - 109680 | 7813.33 |
| dna primase | VEIS_RS00480 | P57028 | Positive | 109839 - 111800 | 71625.7 |
| helix-turn-helix domain-containing protein | VEIS_RS00485 | Not Available | Positive | 112053 - 112316 | 9504.1 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
