Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 =

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 is a Gram-positive cocci bacterium known for its arrangement in clusters or singles. As an aerobic organism, it requires oxygen for growth and is categorized as mesophilic, thriving within moderate temperature ranges. This bacterium is non-motile and possesses flagella, yet it does not utilize them for movement. S. saprophyticus is primarily associated with various hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos (cattle), Sus scrofa (pigs), and members of the Phocidae family (seals), along with other metazoans and primates. It exhibits a free-living biotic relationship, allowing it to survive independently in various environments. Clinically, S. saprophyticus is significant due to its association with a range of health effects, particularly urinary tract infections (UTIs). It is known to cause both uncomplicated and community-acquired UTIs, bacteremia, and infective endocarditis. This opportunistic pathogen can lead to infections in susceptible hosts, especially in young women, where it is one of the most common causative agents of UTIs. The presence of multiple replicons (four) and a single membrane structure suggests a complex genetic background that may contribute to its adaptability and pathogenic potential. Understanding the ecological niche and pathogenic characteristics of S. saprophyticus can provide insights into its role in human health and its interactions with various animal hosts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus saprophyticus
Strainsubsp. saprophyticus ATCC 15305 =

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 =
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos
Cell arrangementClusters - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 =


Gene Summary

Adenine Count

841837 bp

Thymine Count

838232 bp

Guanine Count

420762 bp

Cytosine Count

415744 bp

Genome Length

2516575 bp

Protein-coding Genes

2394 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaSSP_RS00005Q4A180Positive509 - 187652213.0
dna polymerase iii subunit betaSSP_RS00010Q5HK00Positive2124 - 325441856.9
s4 domain-containing protein yaaaSSP_RS00015P05650Positive3806 - 40398770.48
dna replication/repair protein recfSSP_RS00020Q4A177Positive4036 - 515142804.3
dna topoisomerase (atp-hydrolyzing) subunit bSSP_RS00025Q5HK03Positive5164 - 709872539.0
dna gyrase subunit aSSP_RS00030Q2G2Q0Positive7134 - 9827100412.0
nad(p)h-hydrate dehydrataseSSP_RS00035Q2G2P8Negative9889 - 1070129519.8
histidine ammonia-lyaseSSP_RS00040Q4A173Positive11098 - 1259755482.2
serine--trna ligaseSSP_RS00045Q4A172Positive12929 - 1421248521.4
azlc family abc transporter permeaseSSP_RS00050P76630Positive14528 - 1522925218.9

Displaying genes 1 – 10 of 2590 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

406 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 406 metabolites

Health Effects

Health ConditionRelationReference
Uti infectionsCausesPMC12929604
Uncomplicated utisCausesPMC12929604
Non-hospital-acquired utisCausesPMC12929604
UtisCausesPMC12929604
Opportunistic infectionsCausesPMC12929604
Infective endocarditisCausesPMC13106746
Tract infectionsCausesPMC13106746
IeCausesPMC13106746
BacteremiaCausesPMC13106746
Urinary tract infection (uti)CausesPMC3974321

Displaying health effects 1 – 10 of 14 in total