Chlamydia pneumoniae AR39

Gram-negativeRodNon-motile

Kingdom

Pseudomonadati

Phylum

Chlamydiota

Class

Chlamydiia

Order

Chlamydiales

Family

Chlamydiaceae

Genus

Chlamydia

Description

Chlamydia pneumoniae AR39 is a Gram-negative bacterium characterized by its rod shape and absence of mobility. It possesses two membranes and a single replicon, indicating a relatively simple genomic structure. This organism thrives in a host-associated habitat, suggesting a relationship with a living host is essential for its survival and replication. The optimal growth temperature for Chlamydia pneumoniae AR39 is 37°C, placing it within the mesophilic temperature range, which is typically conducive to human pathogens. Chlamydia pneumoniae is known for its symbiotic biotic relationship with hosts, which may include humans, where it can contribute to respiratory infections. The presence of flagella, although it is a non-motile organism, suggests adaptations for interaction with host cells, potentially facilitating infection processes or evasion of the host immune response. The accession number NC_002179.2 refers to the genomic data available for this strain, providing a resource for further research into its genetic makeup and pathogenic mechanisms. Understanding the characteristics of Chlamydia pneumoniae AR39 is crucial, as it highlights the intricate relationship between the organism and its host, emphasizing the importance of studying host-associated microbes in the context of human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumChlamydiota
ClassChlamydiia
OrderChlamydiales
FamilyChlamydiaceae
GenusChlamydia
SpeciesChlamydia pneumoniae
StrainAR39

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Chlamydia pneumoniae AR39
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chlamydia pneumoniae AR39


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

962 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uridine kinaseCP_RS00055Not AvailablePositive15917 - 1658525760.0
rhodanese-related sulfurtransferaseCP_RS00060Not AvailableNegative16667 - 1764137447.4
30s ribosomal protein s4CP_RS00065Not AvailablePositive17858 - 1848724005.5
deoxyribonuclease ivCP_RS00070Not AvailableNegative18606 - 1948732390.7
lipid ii flippase murjCP_RS00080Not AvailablePositive19982 - 2162561896.7
hypothetical proteinCP_RS00085Not AvailablePositive21728 - 2299648376.6
hypothetical proteinCP_RS00090Not AvailablePositive23108 - 2506368221.2
ct620/ct621 family type iii secretion system effectorCP_RS00095Not AvailableNegative25390 - 2800896447.5
ct620/ct621 family type iii secretion system effectorCP_RS00100Not AvailablePositive28213 - 3070891044.4
hypothetical proteinCP_RS00105Not AvailablePositive30819 - 310016776.03

Displaying genes 11 – 20 of 1093 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

44 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002812aldehydo-D-glucose 6-phosphateC6H13O9PChemical structure of aldehydo-D-glucose 6-phosphateNot available
Average260.1358Da
Monoisotopic260.0297185Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da

Displaying 1–10 of 44 metabolites

Health Effects

No health effects information available for this bacterium.