Fibrobacter sp. UWB1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWB1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which likely aids in motility. This organism is notable for having a single replicon, indicating a streamlined genomic structure. The genetic sequence for Fibrobacter sp. UWB1 is cataloged under the accession number MWQL00000000.1. The classification of Fibrobacter sp. within the broader context of microbial ecology suggests that it may play a role in the degradation of complex carbohydrates, particularly in environments rich in plant material. Members of the Fibrobacter genus are often associated with the rumen of herbivorous animals, where they contribute to the breakdown of cellulose and hemicellulose. This process is critical for nutrient cycling and energy flow in ecosystems, particularly in those dominated by plant biomass. In summary, Fibrobacter sp. UWB1's Gram-negative, rod-shaped morphology, along with its motility and genomic characteristics, positions it as a potentially important player in the degradation of plant materials, thereby impacting the ecological dynamics of its environment.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWB1
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWB1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWB1 NODE_46, whole genome shotgun sequence.

Gene Summary

Adenine Count

886420 bp

Thymine Count

906293 bp

Guanine Count

920448 bp

Cytosine Count

888443 bp

Genome Length

3601604 bp

Protein-coding Genes

2828 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helicaseB7988_12860Not AvailableNegative3131285 - 313306066606.0
shikimate dehydrogenaseB7988_12865Not AvailablePositive3133165 - 313403731549.9
3-dehydroquinate synthaseB7988_12870Not AvailablePositive3134039 - 313564959900.4
epimeraseB7988_12875Not AvailablePositive3135741 - 313672436909.4
hypothetical proteinB7988_12880Not AvailablePositive3136823 - 313783637368.2
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseB7988_12885Not AvailablePositive3137836 - 313865729925.6
glycosyl transferase family 1B7988_12890Not AvailablePositive3138626 - 314007154742.5
dna repair proteinB7988_12895Not AvailablePositive3140104 - 314119541711.1
hypothetical proteinB7988_12900Not AvailableNegative3141273 - 314297363951.5
hypothetical proteinB7988_12905Not AvailableNegative3142973 - 314362324725.6

Displaying genes 2531 – 2540 of 2678 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.