Escherichia coli strain GMR-RB-634

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain GMR-RB-634 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is facultatively anaerobic, capable of thriving in both aerobic and anaerobic environments, and is categorized as mesophilic, with an optimal growth temperature of 37°C. GMR-RB-634 is associated with a diverse range of hosts, including various mammals such as Homo sapiens, Bos taurus, and Canis lupus familiaris, as well as non-mammalian species like Solanum lycopersicum and Apis mellifera. Its ability to inhabit multiple environments suggests a versatile ecological role. GMR-RB-634 is a free-living organism, typically found in host-associated habitats. This strain is notably pathogenic to humans and is linked to a wide array of health issues. It is implicated in urinary tract infections (UTIs), gastrointestinal infections, and can lead to severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The extensive list of health effects associated with GMR-RB-634 includes not only infections like peritonitis and diarrhea but also conditions that can have serious consequences, such as renal failure and abortion in various hosts. The diversity of hosts and the significant health impacts associated with GMR-RB-634 emphasize its potential role in infectious disease dynamics within ecosystems. Its presence in both human and animal hosts highlights the importance of monitoring this strain in relation to public health and veterinary medicine, as well as in understanding its ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain GMR-RB-634

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain GMR-RB-634
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain GMR-RB-634


Gene Summary

Adenine Count

1341792 bp

Thymine Count

1354190 bp

Guanine Count

1351190 bp

Cytosine Count

1382256 bp

Genome Length

5429428 bp

Protein-coding Genes

5151 genes

Non-Coding Genes

349 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail componentBIU72_04240Not AvailableNegative835593 - 83585510384.2
Tail componentBIU72_04245Not AvailableNegative835837 - 83625915608.4
Major tail protein vBIU72_04250Not AvailableNegative836275 - 83701525811.2
Tail componentBIU72_04255Not AvailableNegative837023 - 83741814649.9
Tail componentBIU72_04260Not AvailableNegative837415 - 83799321562.0
Head-tail joining proteinBIU72_04265Not AvailableNegative838005 - 83835812761.8
Dna packaging proteinBIU72_04270Not AvailableNegative838370 - 83876814308.9
Capsid componentBIU72_04275Not AvailableNegative838810 - 83957428311.4
Head-dna stabilization proteinBIU72_04280Not AvailableNegative839642 - 83997411572.5
Capsid componentBIU72_04285Not AvailableNegative839984 - 84130345942.4

Displaying genes 1 – 10 of 5500 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total