Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GMR-RB-634 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1341792 bp
Thymine Count
1354190 bp
Guanine Count
1351190 bp
Cytosine Count
1382256 bp
Genome Length
5429428 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
349 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BIU72_24840 | Not Available | Negative | 4889387 - 4889566 | 6789.61 |
| cyclic-guanylate-specific phosphodiesterase | BIU72_24845 | Not Available | Positive | 4889535 - 4890302 | 29643.0 |
| hypothetical protein | BIU72_24850 | Not Available | Positive | 4890372 - 4892432 | 74409.7 |
| mfs transporter | BIU72_24855 | Not Available | Negative | 4892614 - 4893936 | 47210.9 |
| inner membrane protein yhjd | BIU72_24860 | Not Available | Negative | 4894328 - 4895341 | 37961.6 |
| lysr family transcriptional regulator | BIU72_24865 | Not Available | Negative | 4895390 - 4896289 | 33316.6 |
| helix-turn-helix transcriptional regulator | BIU72_24870 | Not Available | Positive | 4896809 - 4897411 | 22605.6 |
| trehalase | BIU72_24875 | Not Available | Negative | 4897462 - 4899111 | 63700.1 |
| cytochrome-c peroxidase | BIU72_24880 | Not Available | Positive | 4899516 - 4900913 | 51543.2 |
| glutamate decarboxylase | BIU72_24885 | Not Available | Positive | 4901124 - 4901746 | 23805.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





