Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GMR-RB-634 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1341792 bp
Thymine Count
1354190 bp
Guanine Count
1351190 bp
Cytosine Count
1382256 bp
Genome Length
5429428 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
349 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | BIU72_23570 | Not Available | Negative | 4618980 - 4619870 | 32990.4 |
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | BIU72_23575 | Not Available | Negative | 4619867 - 4621849 | 74261.1 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | BIU72_23580 | Not Available | Negative | 4621849 - 4622817 | 36368.4 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | BIU72_23585 | Not Available | Negative | 4622821 - 4623960 | 41609.2 |
| histidine phosphatase family protein | BIU72_23590 | Not Available | Positive | 4624268 - 4624870 | 22291.8 |
| nucleoside triphosphatase | BIU72_23595 | Not Available | Negative | 4624909 - 4625334 | 16343.6 |
| hypothetical protein | BIU72_23600 | Not Available | Positive | 4625612 - 4626154 | 18577.7 |
| competence/damage-inducible protein a | BIU72_23605 | Not Available | Positive | 4626254 - 4627456 | 44258.3 |
| iclr family transcriptional regulator | BIU72_23610 | Not Available | Positive | 4627676 - 4628458 | 28992.0 |
| l-rhamnonate dehydratase | BIU72_23615 | Not Available | Positive | 4628473 - 4629678 | 44220.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





