Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GMR-RB-634 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1341792 bp
Thymine Count
1354190 bp
Guanine Count
1351190 bp
Cytosine Count
1382256 bp
Genome Length
5429428 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
349 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trp operon leader peptide | BIU72_22475 | Not Available | Positive | 4413851 - 4413895 | 1723.19 |
| anthranilate synthase component i | BIU72_22480 | Not Available | Positive | 4413987 - 4415549 | 57539.8 |
| bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase | BIU72_22485 | Not Available | Positive | 4415549 - 4417144 | 56930.4 |
| bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase | BIU72_22490 | Not Available | Positive | 4417145 - 4418506 | 49462.1 |
| tryptophan synthase subunit beta | BIU72_22495 | Not Available | Positive | 4418518 - 4419711 | 43030.6 |
| tryptophan synthase subunit alpha | BIU72_22500 | Not Available | Positive | 4419711 - 4420517 | 28698.7 |
| hypothetical protein | BIU72_22505 | Not Available | Positive | 4420898 - 4421077 | 5988.66 |
| ycie/ycif family protein | BIU72_22510 | Not Available | Positive | 4421189 - 4421662 | 17505.8 |
| ycie/ycif family protein | BIU72_22515 | Not Available | Positive | 4421708 - 4422214 | 18986.5 |
| outer membrane protein ompw | BIU72_22520 | Not Available | Negative | 4422273 - 4422911 | 22957.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





