Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GMR-RB-634 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1341792 bp
Thymine Count
1354190 bp
Guanine Count
1351190 bp
Cytosine Count
1382256 bp
Genome Length
5429428 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
349 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phnk | BIU72_06345 | Not Available | Positive | 1249249 - 1250007 | 27837.6 |
| phosphonate c-p lyase system protein phnl | BIU72_06350 | Not Available | Positive | 1250118 - 1250798 | 24719.0 |
| phosphonate metabolism protein phnm | BIU72_06355 | Not Available | Positive | 1250795 - 1251931 | 42065.9 |
| ribose 1,5-bisphosphokinase | BIU72_06360 | Not Available | Positive | 1251931 - 1252488 | 20730.8 |
| protein phno | BIU72_06365 | Not Available | Positive | 1252475 - 1252909 | 16570.8 |
| phosphonate metabolism protein phnp | BIU72_06370 | Not Available | Positive | 1252911 - 1253669 | 27970.5 |
| hypothetical protein | BIU72_06375 | Not Available | Negative | 1253704 - 1254033 | 13450.3 |
| ribose 5-phosphate isomerase b | BIU72_06380 | Not Available | Negative | 1254102 - 1254551 | 16249.5 |
| murr/rpir family transcriptional regulator | BIU72_06390 | Not Available | Positive | 1254910 - 1255800 | 32364.1 |
| allose abc transporter | BIU72_06395 | Not Available | Positive | 1255859 - 1256794 | 32897.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





