Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GMR-RB-634 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1341792 bp
Thymine Count
1354190 bp
Guanine Count
1351190 bp
Cytosine Count
1382256 bp
Genome Length
5429428 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
349 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid abc transporter atp-binding protein mlaf | BIU72_05425 | Not Available | Negative | 1067666 - 1068475 | 29098.6 |
| calcium/sodium antiporter | BIU72_05430 | Not Available | Positive | 1068685 - 1069662 | 34746.8 |
| arabinose 5-phosphate isomerase kdsd | BIU72_05435 | Not Available | Positive | 1069676 - 1070662 | 35198.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | BIU72_05440 | Not Available | Positive | 1070683 - 1071249 | 19998.3 |
| lps export abc transporter periplasmic protein lptc | BIU72_05445 | Not Available | Positive | 1071246 - 1071821 | 21703.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | BIU72_05450 | Not Available | Positive | 1071790 - 1072347 | 20128.1 |
| abc transporter atp-binding protein | BIU72_05455 | Not Available | Positive | 1072354 - 1073079 | 26802.3 |
| rna polymerase sigma-54 factor | BIU72_05460 | Not Available | Positive | 1073127 - 1074560 | 53996.8 |
| ribosome hibernation promoting factor | BIU72_05465 | Not Available | Positive | 1074583 - 1074870 | 10750.9 |
| pts iia-like nitrogen regulatory protein ptsn | BIU72_05470 | Not Available | Positive | 1074988 - 1075479 | 17960.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





