Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GMR-RB-634 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1341792 bp
Thymine Count
1354190 bp
Guanine Count
1351190 bp
Cytosine Count
1382256 bp
Genome Length
5429428 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
349 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | BIU72_04135 | Not Available | Negative | 815828 - 816526 | 25850.8 |
| hypothetical protein | BIU72_04140 | Not Available | Negative | 816556 - 816918 | 14233.7 |
| hypothetical protein | BIU72_04150 | Not Available | Negative | 818092 - 818553 | 17319.4 |
| type vi secretion system vgr family protein | BIU72_04155 | Not Available | Negative | 818581 - 820482 | 71345.9 |
| two-component sensor histidine kinase | BIU72_04165 | Not Available | Negative | 821219 - 822667 | 54166.8 |
| dna-binding response regulator | BIU72_04170 | Not Available | Negative | 822657 - 823340 | 25396.1 |
| copper transporter | BIU72_04180 | Not Available | Positive | 823497 - 824879 | 50729.0 |
| copper-binding protein | BIU72_04185 | Not Available | Positive | 824903 - 825235 | 12221.9 |
| cation efflux system protein cusb | BIU72_04190 | Not Available | Positive | 825251 - 826474 | 44369.4 |
| cusa/czca family heavy metal efflux rnd transporter | BIU72_04195 | Not Available | Positive | 826486 - 829629 | 114734.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





