Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GMR-RB-634 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1341792 bp
Thymine Count
1354190 bp
Guanine Count
1351190 bp
Cytosine Count
1382256 bp
Genome Length
5429428 bp
Protein-coding Genes
5151 genes
Non-Coding Genes
349 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system hicb family antitoxin | BIU72_04075 | Not Available | Positive | 805561 - 805914 | 13244.7 |
| endopeptidase | BIU72_04080 | Not Available | Negative | 805971 - 806720 | 28921.5 |
| transpeptidase | BIU72_04085 | Not Available | Positive | 807021 - 807761 | 28022.8 |
| class ii glutamine amidotransferase | BIU72_04090 | Not Available | Negative | 807732 - 808499 | 28637.2 |
| phosphoheptose isomerase | BIU72_04095 | Not Available | Negative | 808615 - 809193 | 20816.0 |
| acyl-coa dehydrogenase | BIU72_04100 | Not Available | Positive | 809433 - 811877 | 89187.6 |
| inhibitor of vertebrate lysozyme | BIU72_04105 | Not Available | Negative | 811920 - 812393 | 16873.2 |
| amidohydrolase | BIU72_04110 | Not Available | Positive | 812547 - 813317 | 28972.5 |
| isas1 family transposase | BIU72_04120 | Not Available | Negative | 813742 - 814878 | 43179.0 |
| hypothetical protein | BIU72_04130 | Not Available | Negative | 815259 - 815816 | 21338.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





