Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SJRP/Ec42695 Cotig_84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1425857 bp
Thymine Count
1426936 bp
Guanine Count
1454646 bp
Cytosine Count
1451584 bp
Genome Length
5759023 bp
Protein-coding Genes
5291 genes
Non-Coding Genes
581 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | BZL69_28660 | Not Available | Positive | 5351886 - 5352251 | 13668.2 |
| is110 family transposase | BZL69_28670 | Not Available | Positive | 5352718 - 5353728 | 37418.1 |
| hypothetical protein | BZL69_28675 | Not Available | Positive | 5354190 - 5354414 | 8798.86 |
| resolvase | BZL69_28680 | Not Available | Positive | 5354306 - 5354896 | 22005.6 |
| transposase | BZL69_28685 | Not Available | Positive | 5355029 - 5355817 | 30232.9 |
| dead/deah box helicase | BZL69_28690 | Not Available | Positive | 5356883 - 5359855 | 114090.0 |
| hypothetical protein | BZL69_28695 | Not Available | Positive | 5359855 - 5360040 | 7263.73 |
| restriction endonuclease subunit s | BZL69_28700 | Not Available | Positive | 5360037 - 5361308 | 47239.3 |
| anticodon nuclease | BZL69_28705 | Not Available | Positive | 5361305 - 5362465 | 44895.2 |
| type i restriction-modification system subunit m | BZL69_28710 | Not Available | Positive | 5362462 - 5364069 | 61126.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





