Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SJRP/Ec42695 Cotig_84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1425857 bp
Thymine Count
1426936 bp
Guanine Count
1454646 bp
Cytosine Count
1451584 bp
Genome Length
5759023 bp
Protein-coding Genes
5291 genes
Non-Coding Genes
581 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f plasmid transfer operon, traf, family protein | BZL69_22695 | Not Available | Negative | 4318747 - 4318929 | 6364.7 |
| conjugal transfer protein trae | BZL69_22700 | Not Available | Negative | 4319031 - 4319852 | 31212.1 |
| integrase | BZL69_22705 | Not Available | Negative | 4320065 - 4321144 | 41503.3 |
| shufflon protein d' | BZL69_22710 | Not Available | Positive | 4321177 - 4321392 | 7896.01 |
| shufflon protein b | BZL69_22715 | Not Available | Negative | 4321402 - 4321704 | 10881.1 |
| pilus assembly protein pilv | BZL69_22720 | Not Available | Positive | 4321709 - 4321900 | 6884.08 |
| shufflon protein c | BZL69_22725 | Not Available | Negative | 4321897 - 4322148 | 9274.83 |
| prepilin, shufflon protein a | BZL69_22730 | Not Available | Positive | 4322183 - 4322524 | 11561.2 |
| shufflon protein | BZL69_22735 | Not Available | Negative | 4322573 - 4323616 | 37809.2 |
| prepilin peptidase | BZL69_22740 | Not Available | Negative | 4323613 - 4324263 | 23512.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





