Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SJRP/Ec42695 Cotig_84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1425857 bp
Thymine Count
1426936 bp
Guanine Count
1454646 bp
Cytosine Count
1451584 bp
Genome Length
5759023 bp
Protein-coding Genes
5291 genes
Non-Coding Genes
581 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | BZL69_17210 | Not Available | Negative | 3301339 - 3303036 | 63899.9 |
| type iii effector | BZL69_17215 | Not Available | Negative | 3303239 - 3304588 | 50004.6 |
| hypothetical protein | BZL69_17220 | Not Available | Negative | 3304632 - 3305783 | 43555.2 |
| type iii cell invasion protein sipb | BZL69_17225 | Not Available | Negative | 3305796 - 3307577 | 64251.7 |
| cesd/sycd/lcrh family type iii secretion system chaperone | BZL69_17235 | Not Available | Negative | 3307824 - 3308321 | 19072.7 |
| hypothetical protein | BZL69_17240 | Not Available | Negative | 3308623 - 3308916 | 11066.3 |
| lipoprotein nlpa | BZL69_17250 | Not Available | Positive | 3309126 - 3309944 | 29538.4 |
| eama family transporter | BZL69_17255 | Not Available | Negative | 3309948 - 3310871 | 33030.3 |
| mfs transporter | BZL69_17260 | Not Available | Negative | 3310982 - 3312166 | 43512.1 |
| cytoplasmic protein | BZL69_17265 | Not Available | Negative | 3312554 - 3312697 | 5462.88 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





