Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SJRP/Ec42695 Cotig_84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1425857 bp
Thymine Count
1426936 bp
Guanine Count
1454646 bp
Cytosine Count
1451584 bp
Genome Length
5759023 bp
Protein-coding Genes
5291 genes
Non-Coding Genes
581 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnose/proton symporter rhat | BZL69_14565 | Not Available | Positive | 2775385 - 2776419 | 37310.1 |
| arac family transcriptional regulator | BZL69_14570 | Not Available | Negative | 2776416 - 2777354 | 35784.5 |
| transcriptional activator rhas | BZL69_14575 | Not Available | Negative | 2777338 - 2778174 | 32404.2 |
| hypothetical protein | BZL69_14580 | Not Available | Negative | 2778234 - 2778383 | 5685.84 |
| rhamnulokinase | BZL69_14585 | Not Available | Positive | 2778462 - 2779931 | 54003.9 |
| l-rhamnose isomerase | BZL69_14590 | Not Available | Positive | 2779928 - 2781187 | 47172.0 |
| rhamnulose-1-phosphate aldolase | BZL69_14595 | Not Available | Positive | 2781270 - 2782094 | 30156.2 |
| l-rhamnose mutarotase | BZL69_14600 | Not Available | Positive | 2782104 - 2782418 | 12263.5 |
| porin | BZL69_14605 | Not Available | Negative | 2782459 - 2783853 | 51887.1 |
| sulfurtransferase fdhd | BZL69_14620 | Not Available | Negative | 2784985 - 2785818 | 30533.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





