Xenorhabdus vietnamensis strain DSM 22392 Xvie_149

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus vietnamensis strain DSM 22392, designated as Xvie_149, is characterized as a rod-shaped bacterium. This strain possesses a single replicon, indicating a streamlined genetic organization which can be advantageous for stability and replication under varying conditions. A notable feature of Xvie_149 is the presence of flagella, which enables motility, facilitating interactions with its environment and potentially enhancing its pathogenicity or symbiotic relationships. This strain specifically associates with hosts from the genus Steinernema, which are nematodes known for their entomopathogenic properties. The relationship between Xenorhabdus and Steinernema is significant, as these bacteria are often symbiotic with their nematode hosts. The nematodes carry the bacteria within their bodies and release them into insect cadavers, where the bacteria proliferate and contribute to the breakdown of the host tissue, providing nutrients for the nematodes. The genomic data for Xvie_149 is cataloged under the accession number MUBJ00000000.1, which allows for further research and potential applications in biocontrol, given the ecological roles of both the bacterium and its nematode hosts. Understanding the interactions within this symbiotic relationship can provide insights into biological control mechanisms in agriculture, highlighting the importance of Xenorhabdus vietnamensis in ecological and agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus vietnamensis
Strainstrain DSM 22392 Xvie_149

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus vietnamensis strain DSM 22392 Xvie_149


Gene Summary

Adenine Count

1323264 bp

Thymine Count

1335614 bp

Guanine Count

1017157 bp

Cytosine Count

987650 bp

Genome Length

4666385 bp

Protein-coding Genes

3728 genes

Non-Coding Genes

394 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Gp25 base plate wedge subunitXvie_00345Not AvailableNegative391623 - 39204516049.0
hypothetical proteinXvie_00346Not AvailableNegative392056 - 39367259878.1
hypothetical proteinXvie_00347Not AvailableNegative393672 - 39435825052.9
hypothetical proteinXvie_00348Not AvailableNegative394355 - 3945527383.85
Putative tail tube protein 1Xvie_00349Not AvailableNegative394549 - 39500717298.7
Trna-gln;Not AvailableNot AvailablePositive394623 - 394697Not Available
Trna-met;Not AvailableNot AvailablePositive394712 - 394788Not Available
Trna-gln;Not AvailableNot AvailablePositive394830 - 394904Not Available
Putative tail sheath proteinXvie_00350Not AvailableNegative395023 - 39627046295.5
Trna-gln;Not AvailableNot AvailablePositive394988 - 395062Not Available

Displaying genes 1 – 10 of 4122 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.