Flavobacterium oreochromis strain 1214

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium oreochromis strain 1214 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates its motility in aquatic environments. This strain possesses a single replicon, indicating a streamlined genetic structure that can be advantageous for adaptability and survival in various ecological niches. The strain is cataloged under the accession number MTCY00000000.1, providing a reference point for researchers interested in its genetic and biochemical properties. As a member of the Flavobacterium genus, it is expected to exhibit features typical of this group, such as the ability to degrade complex organic materials, which plays a crucial role in nutrient cycling within its habitat. Understanding the traits of Flavobacterium oreochromis strain 1214 contributes to our broader knowledge of microbial diversity in aquatic ecosystems. Its rod shape and motility may allow it to exploit different microenvironments, potentially influencing interactions with other microorganisms and the overall dynamics of the microbial community. The presence of a single replicon suggests a focus on efficient replication and survival strategies, which may be vital for its ecological success. This bacterium's traits underscore its potential role in biogeochemical processes in freshwater systems, where it may contribute to the degradation of organic matter, thereby impacting nutrient availability and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium oreochromis
Strainstrain 1214

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium oreochromis strain 1214
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium oreochromis strain 1214

Gene Summary

Adenine Count

1180143 bp

Thymine Count

1185279 bp

Guanine Count

508539 bp

Cytosine Count

504918 bp

Genome Length

3378879 bp

Protein-coding Genes

2939 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
single-stranded-dna-specific exonuclease recjBWK62_05005Not AvailablePositive1111964 - 111365263179.5
mfs transporterBWK62_05010Not AvailablePositive1114064 - 111530244899.3
ld-carboxypeptidaseBWK62_05015Not AvailableNegative1115541 - 111657839308.5
hypothetical proteinBWK62_05020Not AvailableNegative1116822 - 111746325980.2
hypothetical proteinBWK62_05025Not AvailableNegative1117591 - 111837630445.6
hypothetical proteinBWK62_05030Not AvailableNegative1118622 - 111929025393.7
nucleoid-associated protein, ybab/ebfc familyBWK62_05035Not AvailableNegative1119723 - 112004911915.5
oligopeptidase bBWK62_05040Not AvailablePositive1120107 - 112219180308.6
cystathionine beta-synthaseBWK62_05045Not AvailablePositive1122241 - 112327838538.6
hypothetical proteinBWK62_05050Not AvailableNegative1123537 - 112409421635.2

Displaying genes 1031 – 1040 of 3045 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.