Aliivibrio sifiae strain NBRC 105001

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Aliivibrio sifiae strain NBRC 105001 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain is cataloged under the accession number MSCP00000000.1 and is notable for possessing a single replicon, indicating a streamlined genomic organization. The classification of A. sifiae within the Aliivibrio genus suggests ecological relevance in aquatic environments, as members of this genus are typically associated with marine habitats. The presence of flagella not only aids in mobility but may also contribute to the bacterium's ability to colonize surfaces and interact with other microorganisms, enhancing its ecological adaptability. The information available for A. sifiae strain NBRC 105001 underscores its potential role in marine ecosystems, possibly involving nutrient cycling or interactions within microbial communities. Further research on this strain could provide insights into its specific ecological functions and contributions to the health of aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio sifiae
Strainstrain NBRC 105001

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Aliivibrio sifiae strain NBRC 105001
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aliivibrio sifiae strain NBRC 105001 scaffold00008, whole genome

Gene Summary

Adenine Count

1439570 bp

Thymine Count

1420793 bp

Guanine Count

874235 bp

Cytosine Count

897538 bp

Genome Length

4743237 bp

Protein-coding Genes

4036 genes

Non-Coding Genes

112 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinBTO23_03440Not AvailablePositive767862 - 76950859965.5
Baseplate assembly protein vBTO23_03445Not AvailablePositive769510 - 7697076718.12
AttrNot AvailableNot AvailablePositive771799 - 771816Not Available
outer membrane channel protein tolcBTO23_00005Not AvailableNegative559 - 188447961.5
adp-ribose diphosphataseBTO23_00010Not AvailablePositive2117 - 275523604.0
dehydrogenaseBTO23_00015Not AvailablePositive2757 - 317616444.1
3',5'-cyclic-amp phosphodiesteraseBTO23_00020Not AvailablePositive3205 - 402930724.6
esterase yqiaBTO23_00025Not AvailablePositive4031 - 461522125.6
dna topoisomerase iv subunit bBTO23_00030Not AvailablePositive4759 - 663969289.9
dna topoisomerase iv subunit aBTO23_00035Not AvailablePositive6643 - 891684751.0

Displaying genes 41 – 50 of 4148 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.