Aliivibrio salmonicida LFI1238

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Vibrio salmonicida is a Gram-negative marine bacterium that is a cause of cold-water vibriosis in Atlantic salmon (Salmo salar), cod and occasionally rainbow trout. It is prevalent in fish farms. Clinical signs are inappetence and erratic swimming, with anaemia and haemorrhage with a generalized septicaemia, presenting large amounts of bacterial cells in the blood of moribund or recently dead fish. The haemorrhages are mainly found in the integument surrounding the internal organs of the fish (adapted from http://www.spaquaculture.com/default.aspx?pageid=529). Vaccines are available against this pathogen. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio salmonicida
StrainLFI1238

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aliivibrio salmonicida LFI1238
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangePsychrophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Gadus morhua
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tray domain-containing proteinVSAL_RS21720Not AvailablePositive111 - 2816620.96
type iv conjugative transfer system pilin traaVSAL_RS21725Not AvailablePositive423 - 7049514.85
type iv conjugative transfer system protein tralVSAL_RS21730Not AvailablePositive733 - 103511452.2
type iv conjugative transfer system protein traeVSAL_RS21735Not AvailablePositive1035 - 159520326.7
type-f conjugative transfer system secretin trakVSAL_RS21740Not AvailablePositive1592 - 234727642.1
trbi/virb10 family proteinVSAL_RS21745Not AvailablePositive2337 - 376750983.3
type iv conjugative transfer system lipoprotein travVSAL_RS21750Not AvailablePositive3780 - 418114779.6
type iv secretion system protein tracVSAL_RS21755P18004Positive4191 - 672293954.4
type-f conjugative transfer system protein trbiVSAL_RS21760Not AvailablePositive6719 - 706612857.5
type-f conjugative transfer system protein trawVSAL_RS21765Not AvailablePositive7063 - 771924547.0

Displaying genes 1 – 10 of 4514 in total

Metabolites

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Health Effects

No health effects information available for this bacterium.