Aliivibrio sifiae strain NBRC 105001

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Aliivibrio sifiae strain NBRC 105001 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain is cataloged under the accession number MSCP00000000.1 and is notable for possessing a single replicon, indicating a streamlined genomic organization. The classification of A. sifiae within the Aliivibrio genus suggests ecological relevance in aquatic environments, as members of this genus are typically associated with marine habitats. The presence of flagella not only aids in mobility but may also contribute to the bacterium's ability to colonize surfaces and interact with other microorganisms, enhancing its ecological adaptability. The information available for A. sifiae strain NBRC 105001 underscores its potential role in marine ecosystems, possibly involving nutrient cycling or interactions within microbial communities. Further research on this strain could provide insights into its specific ecological functions and contributions to the health of aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio sifiae
Strainstrain NBRC 105001

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Aliivibrio sifiae strain NBRC 105001
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aliivibrio sifiae strain NBRC 105001 scaffold00008, whole genome

Gene Summary

Adenine Count

1439570 bp

Thymine Count

1420793 bp

Guanine Count

874235 bp

Cytosine Count

897538 bp

Genome Length

4743237 bp

Protein-coding Genes

4036 genes

Non-Coding Genes

112 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine acetyltransferaseBTO23_13930Not AvailablePositive3148419 - 314894020656.4
formate transporter focaBTO23_13935Not AvailableNegative3149029 - 315049252760.5
lysr family transcriptional regulatorBTO23_13940Not AvailablePositive3150685 - 315159034056.2
hypothetical proteinBTO23_13945Not AvailablePositive3151693 - 315237326053.6
chemotaxis proteinBTO23_13950Not AvailablePositive3152567 - 315442967755.5
amino acid abc transporter permeaseBTO23_13955Not AvailableNegative3154511 - 315538332807.6
amino acid abc transporter substrate-binding proteinBTO23_13960Not AvailableNegative3155389 - 315619830243.8
polar amino acid abc transporter permeaseBTO23_13965Not AvailableNegative3156214 - 315700829609.5
glutamine abc transporter atp-binding proteinBTO23_13970Not AvailableNegative3157013 - 315775927809.7
3-deoxy-7-phosphoheptulonate synthaseBTO23_13975Not AvailablePositive3158012 - 315906438405.8

Displaying genes 2761 – 2770 of 4148 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.