Aliivibrio sifiae strain NBRC 105001

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Aliivibrio

Description

Aliivibrio sifiae strain NBRC 105001 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain is cataloged under the accession number MSCP00000000.1 and is notable for possessing a single replicon, indicating a streamlined genomic organization. The classification of A. sifiae within the Aliivibrio genus suggests ecological relevance in aquatic environments, as members of this genus are typically associated with marine habitats. The presence of flagella not only aids in mobility but may also contribute to the bacterium's ability to colonize surfaces and interact with other microorganisms, enhancing its ecological adaptability. The information available for A. sifiae strain NBRC 105001 underscores its potential role in marine ecosystems, possibly involving nutrient cycling or interactions within microbial communities. Further research on this strain could provide insights into its specific ecological functions and contributions to the health of aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusAliivibrio
SpeciesAliivibrio sifiae
Strainstrain NBRC 105001

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Aliivibrio sifiae strain NBRC 105001
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aliivibrio sifiae strain NBRC 105001 scaffold00008, whole genome

Gene Summary

Adenine Count

1439570 bp

Thymine Count

1420793 bp

Guanine Count

874235 bp

Cytosine Count

897538 bp

Genome Length

4743237 bp

Protein-coding Genes

4036 genes

Non-Coding Genes

112 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
preprotein translocase subunit secgBTO23_09500Not AvailableNegative2134038 - 213437011276.5
phosphoglucosamine mutaseBTO23_09505Not AvailableNegative2134522 - 213585947734.6
dihydropteroate synthaseBTO23_09510Not AvailableNegative2135910 - 213674630421.0
atp-dependent metalloproteaseBTO23_09515Not AvailableNegative2136813 - 213877772214.5
23s rrna (uridine(2552)-2'-o)-methyltransferaseBTO23_09520Not AvailableNegative2138863 - 213949223368.2
rna-binding proteinBTO23_09525Not AvailablePositive2139611 - 213990710991.6
transcription elongation factor greaBTO23_09530Not AvailableNegative2140004 - 214047717499.0
hypothetical proteinBTO23_09535Not AvailablePositive2141071 - 214205734818.8
serine-type d-ala-d-ala carboxypeptidaseBTO23_09540Not AvailablePositive2142203 - 214361252105.0
carbamoyl phosphate synthase large subunitBTO23_09545Not AvailableNegative2143741 - 2146971117775.0

Displaying genes 1881 – 1890 of 4148 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.