Pseudonocardia sp. Ae706_Ps2

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia sp. Ae706_Ps2 is characterized as a rod-shaped bacterium with a single replicon, indicating a relatively simple genomic structure. The designation "Pseudonocardia" suggests that this organism belongs to a genus known for its role in the degradation of complex organic compounds, often associated with soil and plant materials. The accession number MCIQ00000000.1 provides a reference for genomic data related to this strain, facilitating further studies on its genetic makeup and potential metabolic pathways. Given the ecological niche typically occupied by Pseudonocardia species, it is likely that Ae706_Ps2 contributes to the biogeochemical cycling of nutrients within its environment. Pseudonocardia species are often investigated for their capabilities in bioaugmentation and bioremediation processes, particularly in the degradation of pollutants. The rod shape of Ae706_Ps2 may confer advantages in certain environments, such as enhanced motility or surface attachment, which are important for survival and interaction with substrates. In summary, the characteristics of Pseudonocardia sp. Ae706_Ps2 suggest that it plays a significant role in ecological processes, particularly in the degradation of organic materials, which is vital for maintaining ecosystem health and functionality. Further research on its genomic features could elucidate its specific metabolic capabilities and ecological interactions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia sp. Ae706_Ps2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia sp. Ae706_Ps2 Ae706Ps2_SC21, whole genome shotgun

Gene Summary

Adenine Count

899644 bp

Thymine Count

893944 bp

Guanine Count

2483266 bp

Cytosine Count

2476089 bp

Genome Length

6762097 bp

Protein-coding Genes

6728 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gcn5-related n-acetyltransferaseAe706Ps2_2133cNot AvailableNegative2325068 - 232589229355.3
1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthaseAe706Ps2_2134cNot AvailableNegative2325947 - 232711341010.4
3'-phosphatase, 5'-polynucleotide kinase, phage-associatedAe706Ps2_2135cNot AvailableNegative2327161 - 232765218628.1
membrane-associated zinc metalloproteaseAe706Ps2_2136cNot AvailableNegative2327649 - 232896846933.8
1-deoxy-d-xylulose 5-phosphate reductoisomeraseAe706Ps2_2137cNot AvailableNegative2328965 - 233013140039.8
hypothetical proteinAe706Ps2_2138Not AvailablePositive2330166 - 233048911344.7
atp-dependent dna ligase ligcAe706Ps2_2139Not AvailablePositive2330514 - 233149136483.6
hypothetical proteinAe706Ps2_2140Not AvailablePositive2331503 - 23316796260.72
g:t/u mismatch-specific uracil/thymine dna-glycosylaseAe706Ps2_2141cNot AvailableNegative2331676 - 233226920850.0
atp-dependent dna ligase ligcAe706Ps2_2142Not AvailablePositive2332392 - 233345639708.3

Displaying genes 2151 – 2160 of 6801 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.