Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Aliivibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Aliivibrio |
| Species | Aliivibrio fischeri |
| Strain | strain 5F97 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Symbiotic |
| Host(s) | Sparus aurata, Euprymna scolopes, Sepiida |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1345339 bp
Thymine Count
1330129 bp
Guanine Count
802797 bp
Cytosine Count
862748 bp
Genome Length
4343102 bp
Protein-coding Genes
3800 genes
Non-Coding Genes
209 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium transport protein trka | A6E13_06530 | Not Available | Negative | 3282014 - 3283390 | 50517.9 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase | A6E13_06535 | Not Available | Negative | 3283415 - 3284695 | 47908.3 |
| methionyl-trna formyltransferase | A6E13_06540 | Not Available | Negative | 3284800 - 3285747 | 34429.2 |
| peptide deformylase | A6E13_06545 | Not Available | Negative | 3285765 - 3286277 | 18997.8 |
| peptidoglycan-binding protein | A6E13_06550 | Not Available | Positive | 3286395 - 3287465 | 39972.8 |
| dna protecting protein dpra | A6E13_06555 | Not Available | Positive | 3287474 - 3288583 | 39847.7 |
| hypothetical protein | A6E13_06560 | Not Available | Positive | 3288586 - 3289059 | 18132.6 |
| dna topoisomerase | A6E13_06565 | Not Available | Positive | 3289070 - 3289639 | 21119.2 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | A6E13_06570 | Not Available | Negative | 3289677 - 3290789 | 40937.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | A6E13_06575 | Not Available | Negative | 3290792 - 3291277 | 16774.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

