Agrobacterium tumefaciens strain B140/95

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain B140/95 is a Gram-negative, rod-shaped bacterium that optimally grows at 25.0°C and requires oxygen for its metabolic processes, classifying it as an aerobe. This strain exhibits versatility in its habitat, being found in various environments, which may include soil, plant surfaces, and other ecological niches where it can interact with plant hosts. The ability of A. tumefaciens to thrive in diverse habitats suggests its potential role in plant-microbe interactions, possibly contributing to nutrient cycling and plant health in its ecological niches. Understanding the adaptability of strain B140/95 to multiple environments can provide insights into its ecological significance and interactions within microbial communities. Furthermore, the optimal growth temperature of 25.0°C aligns with many temperate and subtropical environments, indicating its potential prevalence in agricultural systems where temperature regulation is critical for crop health. Overall, the traits observed in Agrobacterium tumefaciens strain B140/95 underscore its ecological versatility and potential contributions to plant-associated microbiomes, warranting further investigation into its role in agricultural contexts and microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain B140/95

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain B140/95
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Viridiplantae, Triticum aestivum, Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain B140/95


Gene Summary

Adenine Count

1163452 bp

Thymine Count

1167173 bp

Guanine Count

1689052 bp

Cytosine Count

1697403 bp

Genome Length

5717463 bp

Protein-coding Genes

5249 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Terminase large subunitA6U90_04170Not AvailablePositive840840 - 84209945827.2
Hypothetical proteinA6U90_04175Not AvailablePositive842546 - 84318423569.3
stress responsive proteinA6U90_04180Not AvailablePositive843244 - 84355211393.5
Portal proteinA6U90_04185Not AvailablePositive843808 - 84497442473.8
hypothetical proteinA6U90_04190Not AvailablePositive845170 - 84549010982.5
Putative prohead proteaseA6U90_04195Not AvailablePositive845519 - 84612722546.9
Major capsid proteinA6U90_04200Not AvailablePositive846158 - 84742645437.9
Dna packaging/head-tail-connectorA6U90_04205Not AvailablePositive847622 - 84819120647.1
Head closure proteinA6U90_04210Not AvailablePositive848195 - 84853012562.0
Tail proteinA6U90_04215Not AvailablePositive848527 - 84892214286.4

Displaying genes 1 – 10 of 5372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
TumorsCausesPMC177831
Crown gall diseaseCausesPMC2241609
Crown gall diseaseCausesPMC2653234
Crown gall diseaseCausesPMC11575935
Crown and cane gall symptomsCausesPMC12602688
Crown and cane gallsCausesPMC12602688
Crown gall diseaseCausesPMC9343901
Crown gallCausesPMC12030312
Crown-gall diseaseCausesPMC7248198
Crown gall tumorsCausesPMC8087989

Displaying health effects 1 – 10 of 10 in total