Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain B140/95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1163452 bp
Thymine Count
1167173 bp
Guanine Count
1689052 bp
Cytosine Count
1697403 bp
Genome Length
5717463 bp
Protein-coding Genes
5249 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase subunit glcd | A6U90_02725 | Not Available | Positive | 561988 - 563421 | 50662.2 |
| 2-hydroxy-acid oxidase | A6U90_02730 | Not Available | Positive | 563660 - 564874 | 42764.1 |
| 2-hydroxy-acid oxidase | A6U90_02735 | Not Available | Positive | 564878 - 566179 | 46922.2 |
| lipid a oxidase | A6U90_02740 | Not Available | Negative | 566404 - 567063 | 24177.1 |
| hypothetical protein | A6U90_02745 | Not Available | Negative | 567328 - 568107 | 28443.4 |
| 3-methyladenine dna glycosylase | A6U90_02750 | Not Available | Positive | 568345 - 568974 | 24128.7 |
| hypothetical protein | A6U90_02755 | Not Available | Positive | 568971 - 569417 | 16030.3 |
| hypothetical protein | A6U90_02760 | Not Available | Negative | 569433 - 570476 | 35473.4 |
| lysr family transcriptional regulator | A6U90_02765 | Not Available | Positive | 570558 - 571475 | 32917.9 |
| duf305 domain-containing protein | A6U90_02770 | Not Available | Negative | 571686 - 572060 | 13336.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


