Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain B140/95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1163452 bp
Thymine Count
1167173 bp
Guanine Count
1689052 bp
Cytosine Count
1697403 bp
Genome Length
5717463 bp
Protein-coding Genes
5249 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | A6U90_16500 | Not Available | Negative | 5333372 - 5334424 | 38454.2 |
| beta-mannosidase | A6U90_16505 | Not Available | Positive | 5334913 - 5337378 | 92865.4 |
| l-glyceraldehyde 3-phosphate reductase | A6U90_16510 | Not Available | Positive | 5337504 - 5338535 | 38093.3 |
| hypothetical protein | A6U90_16515 | Not Available | Positive | 5338712 - 5339038 | 12668.5 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | A6U90_16520 | Not Available | Negative | 5339271 - 5340701 | 51154.5 |
| cytochrome oxidase maturation protein, cbb3-type | A6U90_16525 | Not Available | Negative | 5340866 - 5341024 | 5892.11 |
| nitrogen fixation protein fixi | A6U90_16530 | Not Available | Negative | 5341021 - 5343237 | 77999.8 |
| cation transporter | A6U90_16535 | Not Available | Negative | 5343312 - 5343812 | 18280.1 |
| cytochrome c oxidase accessory protein ccog | A6U90_16540 | Not Available | Negative | 5343809 - 5345392 | 59019.8 |
| polyketide cyclase | A6U90_16545 | Not Available | Positive | 5345513 - 5345917 | 14672.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


