Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain B140/95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1163452 bp
Thymine Count
1167173 bp
Guanine Count
1689052 bp
Cytosine Count
1697403 bp
Genome Length
5717463 bp
Protein-coding Genes
5249 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | A6U90_13770 | Not Available | Positive | 4732308 - 4732769 | 17582.3 |
| aldose epimerase | A6U90_13775 | Not Available | Negative | 4732787 - 4733770 | 36057.5 |
| 6-phosphogluconate dehydrogenase | A6U90_13780 | Not Available | Negative | 4733920 - 4734813 | 30717.1 |
| gluconate 5-dehydrogenase | A6U90_13785 | Not Available | Negative | 4734903 - 4735658 | 26183.3 |
| l-idonate 5-dehydrogenase | A6U90_13790 | Not Available | Positive | 4735878 - 4736909 | 36387.1 |
| transcriptional regulator | A6U90_13795 | Not Available | Positive | 4737290 - 4737868 | 21930.5 |
| thiol reductant abc exporter subunit cydd | A6U90_13800 | Not Available | Positive | 4737886 - 4739673 | 62872.0 |
| thiol reductant abc exporter subunit cydc | A6U90_13805 | Not Available | Positive | 4739670 - 4741361 | 59301.5 |
| cytochrome d terminal oxidase subunit 1 | A6U90_13810 | Not Available | Positive | 4741429 - 4743006 | 58130.4 |
| cytochrome d ubiquinol oxidase subunit ii | A6U90_13815 | Not Available | Positive | 4743013 - 4744170 | 42092.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


