Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain B140/95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1163452 bp
Thymine Count
1167173 bp
Guanine Count
1689052 bp
Cytosine Count
1697403 bp
Genome Length
5717463 bp
Protein-coding Genes
5249 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | A6U90_12825 | Not Available | Positive | 4519494 - 4520192 | 25810.8 |
| protein-export chaperone secb | A6U90_12830 | Not Available | Negative | 4520291 - 4520773 | 17320.8 |
| membrane protein fxsa | A6U90_12835 | Not Available | Negative | 4520876 - 4521424 | 19816.6 |
| calcium-binding protein | A6U90_12840 | Not Available | Positive | 4521565 - 4522263 | 25804.5 |
| transglycosylase | A6U90_12845 | Not Available | Positive | 4522260 - 4523369 | 40658.4 |
| dna mismatch repair protein muts | A6U90_12850 | Not Available | Positive | 4523369 - 4523938 | 21207.8 |
| transcriptional regulator | A6U90_12855 | Not Available | Positive | 4523935 - 4524300 | 13420.2 |
| dna gyrase subunit b | A6U90_12860 | Not Available | Positive | 4524457 - 4526892 | 88725.8 |
| nitroreductase | A6U90_12865 | Not Available | Negative | 4526998 - 4527600 | 22415.3 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | A6U90_12870 | Not Available | Positive | 4527729 - 4528571 | 29714.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


