Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain B140/95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1163452 bp
Thymine Count
1167173 bp
Guanine Count
1689052 bp
Cytosine Count
1697403 bp
Genome Length
5717463 bp
Protein-coding Genes
5249 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6U90_25010 | Not Available | Positive | 2719121 - 2719885 | 27825.4 |
| hypothetical protein | A6U90_25015 | Not Available | Negative | 2719895 - 2720245 | 12748.2 |
| l-serine ammonia-lyase | A6U90_25020 | Not Available | Positive | 2720904 - 2722307 | 49743.6 |
| hypothetical protein | A6U90_25025 | Not Available | Positive | 2722373 - 2722807 | 15946.3 |
| transglutaminase | A6U90_25030 | Not Available | Negative | 2722892 - 2723500 | 22800.3 |
| pilus assembly protein pilz | A6U90_25040 | Not Available | Negative | 2724265 - 2724882 | 22798.5 |
| pas domain-containing protein | A6U90_25045 | Not Available | Negative | 2725067 - 2725609 | 20494.7 |
| rhomboid family intramembrane serine protease | A6U90_25050 | Not Available | Positive | 2725964 - 2726701 | 26656.7 |
| inosine-5-monophosphate dehydrogenase | A6U90_25055 | Not Available | Positive | 2726856 - 2727290 | 15258.5 |
| hypothetical protein | A6U90_25060 | Not Available | Negative | 2727343 - 2727672 | 12444.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


