Agrobacterium tumefaciens strain B140/95

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain B140/95 is a Gram-negative, rod-shaped bacterium that requires oxygen for growth, classifying it as an aerobe. This strain exhibits mobility and possesses flagella, allowing it to navigate its environment effectively. It thrives optimally at a temperature of 25°C and is categorized as mesophilic, indicating its adaptability to moderate temperature ranges. This bacterium is free-living and has a diverse habitat, which includes multiple environments. A. tumefaciens strain B140/95 has a significant biotic relationship with various hosts, specifically within the plant kingdom (Viridiplantae). Some of its notable hosts include Triticum aestivum (wheat), Solanum tuberosum (potato), Solanum lycopersicum (tomato), and Oryza sativa (rice), among others. A. tumefaciens is well-known for its role in causing crown gall disease, leading to the formation of tumors on infected plants. The disease manifests through symptoms such as crown and cane galls, which can severely affect plant health and productivity. This pathogenic capability highlights the ecological impact of A. tumefaciens strain B140/95, as it can alter plant growth and development by inducing neoplastic growths. Overall, the unique traits of A. tumefaciens strain B140/95, particularly its pathogenic effects on a wide range of plant species, underscore its importance in both ecological and agricultural contexts, reflecting the intricate relationships between microbial life and plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain B140/95

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain B140/95
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Viridiplantae, Triticum aestivum, Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain B140/95 AS1G6_9, whole genome

Gene Summary

Adenine Count

1163452 bp

Thymine Count

1167173 bp

Guanine Count

1689052 bp

Cytosine Count

1697403 bp

Genome Length

5717463 bp

Protein-coding Genes

5249 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA6U90_24255Not AvailablePositive2573675 - 257452930301.6
nad(p)-dependent oxidoreductaseA6U90_24260Not AvailableNegative2574871 - 257560225681.6
iclr family transcriptional regulatorA6U90_24265Not AvailablePositive2575802 - 257657528057.8
transaldolaseA6U90_24270Not AvailableNegative2576682 - 257764734554.5
laci family transcriptional regulatorA6U90_24275Not AvailablePositive2577853 - 257882734992.4
plasmid stabilization proteinA6U90_24280Not AvailableNegative2578824 - 257911110778.1
6-o-methylguanine dna methyltransferaseA6U90_24285Not AvailableNegative2579404 - 258027631615.8
hypothetical proteinA6U90_24290Not AvailableNegative2580539 - 258102117983.9
endonuclease iiiA6U90_24295Not AvailablePositive2581059 - 258184128802.2
cysteine biosynthesis protein cyszA6U90_24300Not AvailableNegative2581803 - 258254026828.5

Displaying genes 2511 – 2520 of 5372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
TumorsCausesPMC177831
Crown gall diseaseCausesPMC2241609
Crown gall diseaseCausesPMC2653234
Crown gall diseaseCausesPMC11575935
Crown and cane gall symptomsCausesPMC12602688
Crown and cane gallsCausesPMC12602688
Crown gall diseaseCausesPMC9343901
Crown gallCausesPMC12030312
Crown-gall diseaseCausesPMC7248198
Crown gall tumorsCausesPMC8087989

Displaying health effects 1 – 10 of 11 in total