Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain B140/95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1163452 bp
Thymine Count
1167173 bp
Guanine Count
1689052 bp
Cytosine Count
1697403 bp
Genome Length
5717463 bp
Protein-coding Genes
5249 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacid coa-transferase | A6U90_23855 | Not Available | Negative | 2486605 - 2487300 | 24835.7 |
| 3-oxoadipate coa-transferase | A6U90_23860 | Not Available | Negative | 2487297 - 2488004 | 24835.9 |
| iclr family transcriptional regulator | A6U90_23865 | Not Available | Positive | 2488141 - 2488902 | 27360.6 |
| arac family transcriptional regulator | A6U90_23870 | Not Available | Negative | 2488872 - 2489795 | 34333.6 |
| 4-hydroxybenzoate 3-monooxygenase | A6U90_23875 | Not Available | Positive | 2489913 - 2491085 | 43877.0 |
| pca operon transcription factor pcaq | A6U90_23880 | Not Available | Negative | 2491285 - 2492226 | 33700.2 |
| 3-oxoadipate enol-lactonase | A6U90_23885 | Not Available | Positive | 2492321 - 2493118 | 28526.1 |
| 4-carboxymuconolactone decarboxylase | A6U90_23890 | Not Available | Positive | 2493122 - 2493541 | 15162.9 |
| protocatechuate 3,4-dioxygenase subunit beta | A6U90_23895 | Not Available | Positive | 2493538 - 2494278 | 27792.3 |
| protocatechuate 3,4-dioxygenase subunit alpha | A6U90_23900 | Not Available | Positive | 2494281 - 2494901 | 22971.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


