Agrobacterium tumefaciens strain B140/95

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain B140/95 is a Gram-negative, rod-shaped bacterium that requires oxygen for growth, classifying it as an aerobe. This strain exhibits mobility and possesses flagella, allowing it to navigate its environment effectively. It thrives optimally at a temperature of 25°C and is categorized as mesophilic, indicating its adaptability to moderate temperature ranges. This bacterium is free-living and has a diverse habitat, which includes multiple environments. A. tumefaciens strain B140/95 has a significant biotic relationship with various hosts, specifically within the plant kingdom (Viridiplantae). Some of its notable hosts include Triticum aestivum (wheat), Solanum tuberosum (potato), Solanum lycopersicum (tomato), and Oryza sativa (rice), among others. A. tumefaciens is well-known for its role in causing crown gall disease, leading to the formation of tumors on infected plants. The disease manifests through symptoms such as crown and cane galls, which can severely affect plant health and productivity. This pathogenic capability highlights the ecological impact of A. tumefaciens strain B140/95, as it can alter plant growth and development by inducing neoplastic growths. Overall, the unique traits of A. tumefaciens strain B140/95, particularly its pathogenic effects on a wide range of plant species, underscore its importance in both ecological and agricultural contexts, reflecting the intricate relationships between microbial life and plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain B140/95

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain B140/95
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Viridiplantae, Triticum aestivum, Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain B140/95 AS1G6_9, whole genome

Gene Summary

Adenine Count

1163452 bp

Thymine Count

1167173 bp

Guanine Count

1689052 bp

Cytosine Count

1697403 bp

Genome Length

5717463 bp

Protein-coding Genes

5249 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombinaseA6U90_20710Not AvailableNegative1846542 - 184698816370.6
plasmid stabilization proteinA6U90_20715Not AvailableNegative1846951 - 18471999331.92
laci family transcriptional regulatorA6U90_20725Not AvailableNegative1850085 - 185114938196.7
amino acid abc transporter substrate-binding proteinA6U90_20730Not AvailablePositive1851376 - 185220929365.0
amino acid abc transporter atp-binding proteinA6U90_20735Not AvailablePositive1852270 - 185377854317.1
nad-binding proteinA6U90_20740Not AvailablePositive1853797 - 185480435988.4
d-amino-acid oxidaseA6U90_20745Not AvailablePositive1854849 - 185597639034.3
replication initiation protein repcA6U90_20750Not AvailableNegative1856254 - 185746844247.2
plasmid partitioning protein repbA6U90_20755Not AvailableNegative1857670 - 185869837574.6
plasmid partitioning protein repaA6U90_20760Not AvailableNegative1858695 - 185991845221.6

Displaying genes 1851 – 1860 of 5372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
TumorsCausesPMC177831
Crown gall diseaseCausesPMC2241609
Crown gall diseaseCausesPMC2653234
Crown gall diseaseCausesPMC11575935
Crown and cane gall symptomsCausesPMC12602688
Crown and cane gallsCausesPMC12602688
Crown gall diseaseCausesPMC9343901
Crown gallCausesPMC12030312
Crown-gall diseaseCausesPMC7248198
Crown gall tumorsCausesPMC8087989

Displaying health effects 1 – 10 of 11 in total