Agrobacterium tumefaciens strain B140/95

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain B140/95 is a Gram-negative, rod-shaped bacterium that requires oxygen for growth, classifying it as an aerobe. This strain exhibits mobility and possesses flagella, allowing it to navigate its environment effectively. It thrives optimally at a temperature of 25°C and is categorized as mesophilic, indicating its adaptability to moderate temperature ranges. This bacterium is free-living and has a diverse habitat, which includes multiple environments. A. tumefaciens strain B140/95 has a significant biotic relationship with various hosts, specifically within the plant kingdom (Viridiplantae). Some of its notable hosts include Triticum aestivum (wheat), Solanum tuberosum (potato), Solanum lycopersicum (tomato), and Oryza sativa (rice), among others. A. tumefaciens is well-known for its role in causing crown gall disease, leading to the formation of tumors on infected plants. The disease manifests through symptoms such as crown and cane galls, which can severely affect plant health and productivity. This pathogenic capability highlights the ecological impact of A. tumefaciens strain B140/95, as it can alter plant growth and development by inducing neoplastic growths. Overall, the unique traits of A. tumefaciens strain B140/95, particularly its pathogenic effects on a wide range of plant species, underscore its importance in both ecological and agricultural contexts, reflecting the intricate relationships between microbial life and plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain B140/95

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain B140/95
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Viridiplantae, Triticum aestivum, Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain B140/95 AS1G6_9, whole genome

Gene Summary

Adenine Count

1163452 bp

Thymine Count

1167173 bp

Guanine Count

1689052 bp

Cytosine Count

1697403 bp

Genome Length

5717463 bp

Protein-coding Genes

5249 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid transporterA6U90_18355Not AvailableNegative1356752 - 135727020221.4
cold-shock proteinA6U90_18360Not AvailableNegative1357575 - 135787711031.9
hypothetical proteinA6U90_18365Not AvailableNegative1357891 - 135825614095.2
integration host factor subunit betaA6U90_18370Not AvailableNegative1358307 - 135861511564.7
vira/g regulated proteinA6U90_18375Not AvailableNegative1359227 - 136124575691.0
single-stranded dna-binding proteinA6U90_18380Not AvailableNegative1361311 - 136291260590.8
type iv secretion system protein vire1A6U90_18385Not AvailableNegative1362917 - 13631147158.58
vira/g regulated proteinA6U90_18390Not AvailableNegative1363567 - 136606892984.4
type iv secretion system protein vird4A6U90_18395Not AvailableNegative1366160 - 136813072453.9
type iv secretion system protein virdA6U90_18400Not AvailableNegative1368784 - 137005847549.2

Displaying genes 1401 – 1410 of 5372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
TumorsCausesPMC177831
Crown gall diseaseCausesPMC2241609
Crown gall diseaseCausesPMC2653234
Crown gall diseaseCausesPMC11575935
Crown and cane gall symptomsCausesPMC12602688
Crown and cane gallsCausesPMC12602688
Crown gall diseaseCausesPMC9343901
Crown gallCausesPMC12030312
Crown-gall diseaseCausesPMC7248198
Crown gall tumorsCausesPMC8087989

Displaying health effects 1 – 10 of 11 in total