Flavobacterium crassostreae strain LPB0076 LPBF77

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium crassostreae strain LPB0076 (accession LVEP00000000.1) is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain is part of the mesophilic temperature range, with an optimal growth temperature of 25°C. It possesses flagella, which are typically associated with motility; however, it is classified as non-motile, suggesting the flagella may play other roles in its physiology or ecology. The presence of a single replicon indicates a streamlined genomic organization, which may contribute to its adaptability in various environmental conditions. As a member of the Flavobacterium genus, this strain is likely involved in the degradation of organic matter, particularly in aquatic environments, where it may contribute to nutrient cycling and energy flow. The ecological importance of Flavobacterium crassostreae strain LPB0076 lies in its potential role in marine ecosystems, especially considering its association with oysters, as suggested by its species name. Given its aerobic nature, this bacterium may play a role in the decomposition processes within the aquatic microbiome, facilitating the breakdown of organic materials and influencing the overall health and sustainability of its habitat. Understanding the traits and behaviors of this strain could provide insights into the microbial dynamics in marine environments and their impact on oyster populations.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium crassostreae
Strainstrain LPB0076 LPBF77

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium crassostreae strain LPB0076 LPBF77
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium crassostreae strain LPB0076 LPBF77, whole genome

Gene Summary

Adenine Count

886617 bp

Thymine Count

883625 bp

Guanine Count

489443 bp

Cytosine Count

503156 bp

Genome Length

2762845 bp

Protein-coding Genes

2426 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine recombinase xerdLPBF_02975Not AvailableNegative673629 - 67452834520.8
hypothetical proteinLPBF_02980Not AvailableNegative674608 - 67512018137.6
hypothetical proteinLPBF_02985Not AvailablePositive675423 - 67598620133.1
hypothetical proteinLPBF_02990Not AvailablePositive676230 - 67688023086.3
3-dehydroquinate dehydrataseLPBF_02995Not AvailablePositive677080 - 67749615222.2
cobalt-zinc-cadmium resistance proteinLPBF_03000Not AvailableNegative677525 - 67839431976.9
udp-n-acetylglucosamine 1-carboxyvinyltransferaseLPBF_03005Not AvailableNegative678488 - 67979847337.9
hypothetical proteinLPBF_03010Not AvailableNegative679905 - 68060627429.9
hypothetical proteinLPBF_03015Not AvailableNegative680687 - 68097110723.0
atpaseLPBF_03020Not AvailablePositive681120 - 68165320507.8

Displaying genes 591 – 600 of 2482 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.