Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium crassostreae |
| Strain | strain LPB0076 LPBF77 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
886617 bp
Thymine Count
883625 bp
Guanine Count
489443 bp
Cytosine Count
503156 bp
Genome Length
2762845 bp
Protein-coding Genes
2426 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector | LPBF_05085 | Not Available | Negative | 1099298 - 1099642 | 12643.9 |
| rrna (cytidine-2'-o-)-methyltransferase | LPBF_05090 | Not Available | Negative | 1099639 - 1100373 | 27138.8 |
| hypothetical protein | LPBF_05095 | Not Available | Negative | 1100454 - 1101353 | 33528.8 |
| thymidine kinase | LPBF_05100 | Not Available | Positive | 1101596 - 1102192 | 22235.7 |
| rna polymerase sigma-54 factor | LPBF_05105 | Not Available | Negative | 1102335 - 1103798 | 56074.4 |
| asparagine--trna ligase | LPBF_05110 | Not Available | Negative | 1104012 - 1105448 | 54592.2 |
| rrna methyltransferase | LPBF_05115 | Not Available | Positive | 1105729 - 1106187 | 17109.2 |
| mechanosensitive ion channel protein mscs | LPBF_05120 | Not Available | Negative | 1106263 - 1107093 | 30256.3 |
| transporter | LPBF_05125 | Not Available | Negative | 1107352 - 1109760 | 90992.4 |
| transporter | LPBF_05130 | Not Available | Positive | 1109951 - 1112227 | 84014.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
