Wolbachia endosymbiont of Dactylopius coccus

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Anaplasmataceae

Genus

Wolbachia

Description

Wolbachia is a genus of Gram-negative bacteria that are known to have endosymbiotic relationships with various arthropods, including the cochineal insect Dactylopius coccus. The bacterial cells are classified as bacilli and possess flagella, which may contribute to their motility and potential interaction with the host’s physiological processes. In the case of Dactylopius coccus, Wolbachia is significant for its role in reproductive manipulation and potential influence on the host's biology. The endosymbiont has a single replicon, which is characteristic of many Wolbachia strains, indicating a streamlined genomic structure that may facilitate its adaptation to the specific environment within the host. The accession number for the genomic data of this Wolbachia strain is LSYY00000000.1, which allows for further study and comparison with other Wolbachia strains found in different hosts. The presence of Wolbachia in Dactylopius coccus may influence various biological processes, including reproduction and resistance to pathogens. Ecologically, the relationship between Wolbachia and Dactylopius coccus can have broader implications. For instance, the cochineal insect is important in agriculture and the production of natural dyes. Understanding the dynamics of this endosymbiotic relationship can provide insights into pest management strategies and the sustainable use of Dactylopius coccus in various agricultural applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyAnaplasmataceae
GenusWolbachia
SpeciesWolbachia endosymbiont of Dactylopius coccus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Wolbachia endosymbiont of Dactylopius coccus
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Wolbachia endosymbiont of Dactylopius coccus


Gene Summary

Adenine Count

495389 bp

Thymine Count

492426 bp

Guanine Count

254644 bp

Cytosine Count

255249 bp

Genome Length

1497749 bp

Protein-coding Genes

1246 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive176 - 274Not Available
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive408 - 757Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive473 - 579Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive649 - 3413Not Available
dna repair protein recoTV41_01120B3CPG9Negative110 - 83828234.3
hypothetical proteinTV41_01125Not AvailablePositive1035 - 156220084.2
hypothetical proteinTV41_01130Not AvailableNegative1615 - 195312851.5
ribonucleotide-diphosphate reductase subunit betaTV41_01135Q91FE8Positive2083 - 307238722.9
Ncrna_class:otherNot AvailableNot AvailablePositive2195 - 2356Not Available
hypothetical proteinTV41_01140Not AvailablePositive3204 - 34167943.47

Displaying genes 1 – 10 of 1292 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

45 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da

Displaying 1–10 of 45 metabolites

Health Effects

No health effects information available for this bacterium.